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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs72951893 chr18:65675144 A/G PRHOXNB chr13:28552243-28562774:- 0.72 10.01 9.89E-14 Box Plot
ACC rs72972231 chr2:234081286 C/T PRHOXNB chr13:28552243-28562774:- 0.69 9.04 2.98E-12 Box Plot
ACC rs73024111 chr1:167877693 C/A PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs73024112 chr1:167880237 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.7 3.87E-10 Box Plot
ACC rs73024114 chr1:167880253 A/G PRHOXNB chr13:28552243-28562774:- 0.59 7.7 3.87E-10 Box Plot
ACC rs73024115 chr1:167880296 A/G PRHOXNB chr13:28552243-28562774:- 0.59 7.7 3.87E-10 Box Plot
ACC rs73024116 chr1:167880659 C/T PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs73168708 chr22:32786254 G/C PRHOXNB chr13:28552243-28562774:- 0.56 8.49 2.16E-11 Box Plot
ACC rs73177622 chr7:84389153 C/A PRHOXNB chr13:28552243-28562774:- 0.63 8.32 3.92E-11 Box Plot
ACC rs7319768 chr13:105085271 C/G DUPD1 chr10:76797594-76818272:- 0.97 8.11 8.5E-11 Box Plot
ACC rs73198886 chr3:128546420 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs73198887 chr3:128546426 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs73198889 chr3:128547620 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs73198891 chr3:128553841 T/G OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs73198892 chr3:128559117 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot